CDS
| Accession Number | TCMCG006C122017 |
| gbkey | CDS |
| Protein Id | XP_013640853.1 |
| Location | complement(join(1716256..1716385,1716518..1716748,1716843..1716929,1717029..1717288,1717376..1717479,1717628..1717703,1717787..1717966,1718086..1718184,1718284..1718367,1718660..1718782,1718862..1718954,1719060..1719137,1719269..1719391,1719482..1719622,1719704..1719754,1719839..1719970,1720054..1720131,1720218..1720294,1720374..1720464)) |
| Gene | LOC106346144 |
| GeneID | 106346144 |
| Organism | Brassica napus |
Protein
| Length | 745aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013785399.2 |
| Definition | pre-rRNA-processing protein TSR1 homolog [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | pre-rRNA-processing protein TSR1 homolog |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGGCGCTCTCGAGTTCAAGTCAACAAGGCTCACAAGACTCGCTTCTCCTCCAAATCTTCTCGAAATCTCCACAGAACCTCTCTCCAAGATGGCGGCCGGATTGGTAAAGCGGAGGGTAACCATGTCAAAGGTGCTAGAGCTGCTCGTCTTCAGCGTGGCAAGATGCTCAGAGAGCAGAAGAGAGCAGCGGTTTTGAAGGAGAAGAGAGCTTCAGGAGGATCAACCAGTGCTCCTCGTGTTATCGTCTTGTTTCCTCTTTCTGCTTCTGTGGATTTGAATTCACTTGGTGATGACGTTCTAAAGCTGTTATGTAATGGTGATGGCTCTTCTTCTTCTTCAACAGTTGCGTCTTCTGAGTATAAGCTAAGAGCAACTGTGTTGAAGGCGCCTCACGGGGATCTTCTGACATGCATGGAAATGGCCAAGGTTGCTGATTTGATGGCTTTTGTTGTATCTGCAAACTCCCCATGGGAAGAGAATGTATCTAGCTTCATAGACTCATTCGGAAGTCAGTGCCTTTCTGTGCTTAGATCTATTGGTCTACCTAGCACCACTGTGTTGATTCGTGATTTACCCAGTGAGTTGAAAAAGAAAAATGAGCTGAAAAAGATCTGTGCCTCGCAACTGGCTTCTGAATTTCCTGAGGATTGTAAGTTTTATCCAGCAGATACCAGAGATGAGTTGCATAAGTTCATGTGGCTATTCAAGGCACAAAGGCTTACTGTGCCTCATTGGAGAAGTCAACGGCCATATGTTGTTACTGAGAAGGTTGGGATGGTAGTGGCTAATGAAAGCTCAGGAAAATGCACTCTACTTCTCTCTGGTTACTTGCGTGCTCGCAAACTATCTGTAAATCAGCTGGTCCATGTTTCTGGCGTCGGTGATTTTCAGCTCTCAGAACTTGAAGTCCTGAAGGACCCATTTCCATTGAATGAAAGGAAAAAACAGAATTCCATGGAACTGGATGGTTCACATGATGAAGAGGTATTGAGGTCTCTGCATCCTGATCCCATGAAACAAGAGCCTTTAGTAGCTGAAAACACTCCAGATCCTTTAGCAGGGGAACAGACATGGCCAACTGAGGCAGAGATGGCTGAGGCGGACAGAAATCAGAAACAGGGAAAGCTAAAGAAGAGGACTTTGCCACGAGGGATGTCAGAATATCAGGCTGCTTGGATTGTCGATGAAATAGATGAAGAGGATTCTGATAATGGTGATTCCGATGATGATGGTATGGTATTGGATAAAGAAGAGGATCAATTCTCCTATCAAGACCAAGATTTTGAGGACGATAAAGAAACACTGCGGGATGTGGATAATGAAACTTATAACGATTCCGAGATGATGGATGATGAAAACTTGACAAGGGAGCAGTATGAGGATCAAATGAAGAAAATAAAAGAGGCACATGCCGAGGATGAGGAATTTCCTGATGAAGTAGAGACTCCCATTGATCAGCCTGCAAGAAAACGTTTTGCAAAATACAGGGGTCTCAAATCCTTCAGAACGTCCTCGTGGGATCCAAATGAGTCTCTACCTCAGGACTATGCCAGAATCTTTGCTTTTGATAATCTCGCAAGGACTCAAAAGCTTGTACTCAAGCAAGCCCTGAAGATGGAAGAAGAAAGCAGAGATGATTGTGTACCCACTGGATCATATGTACGGCTGCATATTAAGGAAGTGCCTCTTGTTGCTGCCTCTAAACTATCCTCCCTTGTGAGCTCGAAACCCATTATAGCATTTGGGCTTTTACAGCATGAATCCAAGATGTCGGTTCTGCACTTTAGCGTTAAGAAGTATGATGGCTATGAAGATCCTATCAAAACTAAAGAAGAACTTATGTTCCATGTTGGTTTCCGCCAATTCGTTGCAAGACCAGTGTTTTCAACCGACAATTTCAGCTCAGACAAGCACAAGATGGAGCGGTTTCTGCACCCGGGGCGTTTCTCATTGGCTTCAGTATACGGCCCGATATCTTTCCCATCACTTCCTTTGGTAGTTCTGAAGATTTCTGAAGTGTCGGATGCTCCTGCCGTTGCTGCTCTTGGTTCCTTGAAAAGCATTGAACCCAACAAAATAATCTTAAAGAAGATAATATTAACTGGGTATCCTCAGAGAGTATCAAAGATGAAAGCATCAGTGAGATATATGTTCCATAACCCGGAAGACGTGAGATGGTTTAAGGTAAGAAAGAGAAGGAAAAATATGGTGGATTCAATTATTTGTCTAAAATAA |
| Protein: MGRSRVQVNKAHKTRFSSKSSRNLHRTSLQDGGRIGKAEGNHVKGARAARLQRGKMLREQKRAAVLKEKRASGGSTSAPRVIVLFPLSASVDLNSLGDDVLKLLCNGDGSSSSSTVASSEYKLRATVLKAPHGDLLTCMEMAKVADLMAFVVSANSPWEENVSSFIDSFGSQCLSVLRSIGLPSTTVLIRDLPSELKKKNELKKICASQLASEFPEDCKFYPADTRDELHKFMWLFKAQRLTVPHWRSQRPYVVTEKVGMVVANESSGKCTLLLSGYLRARKLSVNQLVHVSGVGDFQLSELEVLKDPFPLNERKKQNSMELDGSHDEEVLRSLHPDPMKQEPLVAENTPDPLAGEQTWPTEAEMAEADRNQKQGKLKKRTLPRGMSEYQAAWIVDEIDEEDSDNGDSDDDGMVLDKEEDQFSYQDQDFEDDKETLRDVDNETYNDSEMMDDENLTREQYEDQMKKIKEAHAEDEEFPDEVETPIDQPARKRFAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNLARTQKLVLKQALKMEEESRDDCVPTGSYVRLHIKEVPLVAASKLSSLVSSKPIIAFGLLQHESKMSVLHFSVKKYDGYEDPIKTKEELMFHVGFRQFVARPVFSTDNFSSDKHKMERFLHPGRFSLASVYGPISFPSLPLVVLKISEVSDAPAVAALGSLKSIEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVRWFKVRKRRKNMVDSIICLK |